BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D12SP1|AL426368
(728 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1102 1424 0.0
>3x_Contig1102
Length = 3442
Score = 1424 bits (714), Expect = 0.0
Identities = 721/728 (99%)
Strand = Plus / Minus
Query: 1 gtacgccgctcccatattttttaacgattcttttktataaatcatgcacaaaaccagtgt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3037 gtacgccgctcccatattttttaacgattcttttgtataaatcatgcacaaaaccagtgt 2978
Query: 61 ctcccgcatggaataacaccggtttgttacccttatgtactatgaacgaacaccataatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2977 ctcccgcatggaataacaccggtttgttacccttatgtactatgaacgaacaccataatg 2918
Query: 121 acctattcgcatctaacacagatcttcctgaccaatgcattgccggcgtggaggatattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2917 acctattcgcatctaacacagatcttcctgaccaatgcattgccggcgtggaggatattt 2858
Query: 181 ggtaaatggtatcttcttgcgcaccttttatcttcacatggcaartttcmcamcatgaca 240
|||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 2857 ggtaaatggtatcttcttgcgcaccttttatcttcacatggcaagtttcccaccatgaca 2798
Query: 241 actccgtgaaattggaaacattgttcattatcatataakawgctaatccttttggaacaa 300
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 2797 actccgtgaaattggaaacattgttcattatcatataagaagctaatccttttggaacaa 2738
Query: 301 tccacattggtttctgtggatgatcatcaccccaaaatttaagacttttttcgtctaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2737 tccacattggtttctgtggatgatcatcaccccaaaatttaagacttttttcgtctaaat 2678
Query: 361 gatctggatggttgtgagaaaccaaaatcaagtctggcgtcggtacatcttcgattttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 gatctggatggttgtgagaaaccaaaatcaagtctggcgtcggtacatcttcgattttcg 2618
Query: 421 ctggcatatcagtgattcgttgtgggccaaaggtgggatgtattawatgtttcgaaaaca 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2617 ctggcatatcagtgattcgttgtgggccaaaggtgggatgtattaaatgtttcgaaaaca 2558
Query: 481 ttggatccgtaagtatcttcaatttatccaatataatcacgctgcatgattgacctagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 ttggatccgtaagtatcttcaatttatccaatataatcacgctgcatgattgacctagcc 2498
Query: 541 atgtgcaatataaccgtttgacaggttcggtgttcacttctttttcgtctgaagaaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2497 atgtgcaatataaccgtttgacaggttcggtgttcacttctttttcgtctgaagaaaatg 2438
Query: 601 gtttaatctcgacttcaatttcattatgagagttatccaaaactcccttggttacccatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2437 gtttaatctcgacttcaatttcattatgagagttatccaaaactcccttggttacccatg 2378
Query: 661 tcggtttatgaataggcatcaactcgtccatttgctctttcgatctcggtagaccacctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2377 tcggtttatgaataggcatcaactcgtccatttgctctttcgatctcggtagaccacctc 2318
Query: 721 tatttctt 728
||||||||
Sbjct: 2317 tatttctt 2310
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4631
Number of Sequences: 1807
Number of extensions: 4631
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 728
length of database: 10,358,551
effective HSP length: 16
effective length of query: 712
effective length of database: 10,329,639
effective search space: 7354702968
effective search space used: 7354702968
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)